Best Mystery Anime of the 1990s

Ranked by community ratings from MyAnimeList across 20 mystery titles spanning 1990–1999.

1
Production I.G · 1995 · 370,722 ratings
Ghost in the Shell is widely praised for its groundbreaking animation, philosophical depth, and immersive cyberpunk...
8.3
2
TMS Entertainment · 1996 · 171,528 ratings
Meitantei Conan is widely praised for its brilliant mysteries, extensive cast, and engaging overarching plot, making it...
8.1
3
Triangle Staff · 1998 · 353,127 ratings
Serial Experiments Lain is a highly divisive anime that sparks intense discussion. While praised for its...
8.1
4
Production I.G · 1993 · 20,231 ratings
Patlabor 2 the Movie is widely praised as a mature, philosophical, and visually stunning film, often considered a...
7.9
5
Sunrise · 1991 · 10,150 ratings
City Hunter '91 is a decent, though somewhat disappointing, conclusion to the original series. Fans appreciate the...
7.5
6
Madhouse · 1998 · 6,798 ratings
Master Keaton is generally well-regarded as an episodic series with intelligent stories and interesting characters....
7.4
7
Madhouse · 1999 · 34,502 ratings
Petshop of Horrors is a short, episodic anime with a unique premise and creepy atmosphere. While the stories are...
7.2
8
Group TAC · 1995 · 16,283 ratings
Audience reception is mixed. While some appreciate the action, character interactions, and nostalgia, many are critical...
7.1
9
AIC · 1998 · 8,155 ratings
Audience reception is mixed, with praise for the show's premise and episodic mysteries, but criticism for its...
7
10
Production I.G · 1994 · 11,502 ratings
Blue Seed is viewed as a solid, though somewhat dated, 90s anime with a strong blend of action, romance, and...
7
11
Xebec · 1998 · 1,668 ratings
Steam Detectives is a largely forgotten but enjoyable steampunk detective show with a noir atmosphere. While it may be...
7
12
Studio Comet · 1991 · 540 ratings
The anime is highly underrated and praised for its horror atmosphere, psychological elements, and engaging characters....
7
13
Studio Pierrot · 1997 · 5,779 ratings
Audience reception to Clamp Gakuen Tanteidan is generally positive, particularly among those who appreciate CLAMP's...
6.9
14
Triangle Staff · 1998 · 1,238 ratings
Saint Luminous Jogakuin is a somewhat divisive anime. While some appreciate its mature tone, character interactions,...
6.9
15
Sunrise · 1999 · 5,081 ratings
Betterman is a divisive anime praised for its unique blend of genres and intricate plot, but criticized for its...
6.8
16
Madhouse · 1996 · 20,110 ratings
Audience reception to X/1999 is highly polarized, with many criticizing its incomprehensible and rushed narrative,...
6.7
17
Group TAC · 1998 · 5,565 ratings
The show is remembered fondly by those who watched it in their youth. However, it's recognized as a children's show...
6.7